Baranyi

Comparing BGFit with R model's description for S7 measurement:

Test estimations with grofit package

Description

Baranyi J. and Roberts T.A. (1994). A dynamic approach to predicting bacterial growth in food. Int. J. Food Microbiol. 23, 277-294.

Options

Estimation is performed on log scale (base e)
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Listing 7 parameters

TitleEstimated parameterDescriptionBottom range for estimationTop range for estimation
h0-0.93314076005601dimensionless parameter quantifying the initial physiological state of the population. From that, the lag time lambda can be calculated as h0/mu.
m0.23057330071513curvature parameter to characterize the transition from the exponential phase
μ max.0.86317543464588maximum specific growth rate
v0.14808644232298curvature parameter to characterize the transition to the exponential phase
y0-4.25517091143651initial population density
ymax0.0asymptotic for the population density
Optimal Cost0.07009047236822fitting cost (not used in the solver and estimator)(n/a)(n/a)
RMSEclick here for more information

Root Mean Square Error (RMSE):

Rmse

For more information: link to Wikipedia articleTrans

R2click here for more information R_square

For more information: link to Wikipedia articleTrans

Biasclick here for more information

Bias Factor (Bf):

Bias

For more information check Ross, T. Indices for performance evaluation of predictive models in food microbiology. Journal of Applied Bacteriology 81, 501–508 (1996).

(link to journal articleTrans )

Accuracyclick here for more information

Accuracry Factor (Af):

Accuracy

For more information check Ross, T. Indices for performance evaluation of predictive models in food microbiology. Journal of Applied Bacteriology 81, 501–508 (1996).

link to journal articleTrans

0.00083 0.97882 1.00054 0.99946

Baranyi's Curve